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MacPorts Portfiles

The MacPorts Project currently distributes 17099 ports, organized across 86 different categories and available below for viewing. This form allows you to search the MacPorts software index, last updated on 2013-05-25 at 08:00:22 America/Los_Angeles.


Or view the complete ports list (17099 ports).


Query Results

18 Portfiles Selected

bowtie 0.12.9
an ultrafast, memory-efficient short read aligner
Maintained by:
Categories: science biology
Platforms: darwin
Dependencies: md5sha1sum
Variants: universal

cell-id 1.4.6
Microscopy based cytometry segmentation software
Maintained by:
Categories: science biology
Platforms: darwin
Dependencies: glib2 tiff

cufflinks 0.9.3
Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.
Maintained by:
Categories: science biology
Platforms: darwin
Dependencies: boost samtools zlib

p5-eval 2.2.8
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: p5.12-eval

p5-ipe 0.1.48
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: p5.12-ipe

p5.10-eval 2.2.8
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: perl5.10

p5.10-ipe 0.1.48
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: p5.10-eval p5.10-libxml-enno p5.10-xml-libxml perl5.10

p5.12-eval 2.2.8
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: perl5.12

p5.12-ipe 0.1.48
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: p5.12-eval p5.12-libxml-enno p5.12-xml-libxml perl5.12

p5.14-eval 2.2.8
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: perl5.14

p5.14-ipe 0.1.48
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: p5.14-eval p5.14-libxml-enno p5.14-xml-libxml perl5.14

p5.16-eval 2.2.8
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: perl5.16

p5.16-ipe 0.1.48
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: p5.16-eval p5.16-libxml-enno p5.16-xml-libxml perl5.16

p5.8-eval 2.2.8
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: perl5.8

p5.8-ipe 0.1.48
Perl module for parameter estimation with hidden Markov models.
Maintained by:
Categories: perl biology
Platforms: darwin
Dependencies: p5.8-eval p5.8-libxml-enno p5.8-xml-libxml perl5.8

py26-ete2 2.0rev90
Python Environment for Tree Exploration (ETE)
Maintained by:
Categories: python biology science
Platforms: darwin
Dependencies: py26-distribute py26-mysql py26-pyqt4 py26-scipy python26

tophat 1.2.0
a fast splice junction mapper for RNA-Seq reads
Maintained by:
Categories: science biology
Platforms: darwin
Dependencies: bowtie samtools zlib

vcellid 0.1
GTK GUI for cell-id
Maintained by:
Categories: science biology
Platforms: darwin
Dependencies: cell-id gtkimageview pkgconfig